GEOS-CHEM SIMULATION v8-01-01: GEOS-5 1-month benchmark ------------------------+------------------------------------------------------ %%% SIMULATION MENU %%% : Start YYYYMMDD, HHMMSS : 20060501 000000 End YYYYMMDD, HHMMSS : 20060516 000000 Run directory : ./ Input restart file : restart.geos5.YYYYMMDDhh Make new restart file? : T Output restart file(s) : restart.geos5.YYYYMMDDhh Root data directory : /data/ctm/GEOS_4x5/ => GCAP subdir : AGRID/YYYY/MM/ => GEOS-3 subdir : GEOS_3/YYYY/MM/ => GEOS-4 subdir : GEOS_4_v4/YYYY/MM/ => GEOS-5 subdir : GEOS_5/YYYY/MM/ => GEOS-FP subdir : GEOS_FP/YYYY/MM/ Dir w/ 1x1 emissions etc: /data/ctm/GEOS_1x1/ Temporary directory : TMP/ Unzip met fields? : F Wait for met fields? : F Use variable tropopause?: T Global offsets I0, J0 : 0 0 ------------------------+------------------------------------------------------ %%% TRACER MENU %%% : Type of simulation : 3 Number of Tracers : 43 Tracer Entries -------> : TR# Name g/mole Tracer Members; () = emitted Tracer #1 : 1 NOx 46.0 NO2 (NO) NO3 HNO2 Tracer #2 : 2 Ox 48.0 (O3) NO2 2NO3 Tracer #3 : 3 PAN 121.0 Tracer #4 : 4 CO 28.0 (CO) Tracer #5 : 5 ALK4 12.0 (4C) Tracer #6 : 6 ISOP 12.0 (5C) Tracer #7 : 7 HNO3 63.0 (HNO3) Tracer #8 : 8 H2O2 34.0 Tracer #9 : 9 ACET 12.0 (3C) Tracer #10 : 10 MEK 12.0 (4C) Tracer #11 : 11 ALD2 12.0 (2C) Tracer #12 : 12 RCHO 58.0 Tracer #13 : 13 MVK 70.0 Tracer #14 : 14 MACR 70.0 Tracer #15 : 15 PMN 147.0 Tracer #16 : 16 PPN 135.0 Tracer #17 : 17 R4N2 119.0 Tracer #18 : 18 PRPE 12.0 (3C) Tracer #19 : 19 C3H8 12.0 (3C) Tracer #20 : 20 CH2O 30.0 (CH2O) Tracer #21 : 21 C2H6 12.0 (2C) Tracer #22 : 22 N2O5 105.0 Tracer #23 : 23 HNO4 79.0 Tracer #24 : 24 MP 48.0 Tracer #25 : 25 DMS 62.0 Tracer #26 : 26 SO2 64.0 Tracer #27 : 27 SO4 96.0 Tracer #28 : 28 SO4s 96.0 Tracer #29 : 29 MSA 96.0 Tracer #30 : 30 NH3 17.0 Tracer #31 : 31 NH4 18.0 Tracer #32 : 32 NIT 62.0 Tracer #33 : 33 NITs 62.0 Tracer #34 : 34 BCPI 12.0 Tracer #35 : 35 OCPI 12.0 Tracer #36 : 36 BCPO 12.0 Tracer #37 : 37 OCPO 12.0 Tracer #38 : 38 DST1 29.0 Tracer #39 : 39 DST2 29.0 Tracer #40 : 40 DST3 29.0 Tracer #41 : 41 DST4 29.0 Tracer #42 : 42 SALA 31.4 Tracer #43 : 43 SALC 31.4 ------------------------+------------------------------------------------------ %%% TRANSPORT MENU %%% : Turn on Transport : T => Use Flux Correction?: T => Fill Negative Values: T => IORD, JORD, KORD : 3 3 7 Transport Timestep [min]: 30 ------------------------+------------------------------------------------------ %%% CONVECTION MENU %%% : Turn on Cloud Conv? : T Turn on PBL Mixing? : T Convect Timestep (min) : 30 ------------------------+------------------------------------------------------ %%% EMISSIONS MENU %%% : Turn on emissions? : T Emiss timestep (min) : 60 Include anthro emiss? : T => Scale to (1985-2005): -1 => Use EMEP emissions? : T => Use BRAVO emissions?: T => Use EDGAR emissions?: T => Use STREETS emiss? : T => Use CAC emissions? : T => Use NEI2005 emiss? : T => Use NEI2008 emiss? : F => Use RETRO emiss? : T => Use RCP emiss? : F RCP scenario ? : RCP60 RCP year ? : 2010 Use EPA/NEI99 (anth+bf)?: F w/ ICARTT modif.? : F w/ VISTAS NOx emis? : F Include biofuel emiss? : T Include biogenic emiss? : T => Use MEGAN inventory?: T => Use MEGAN for MONO? : T Include biomass emiss? : T => Seasonal biomass? : F => Scaled to TOMSAI? : F => Use GFED2 biomass? :--- => monthly GFED2? : T => 8-day GFED2? : F => 3-hr GFED2? : F => synoptic GFED2? : F => Use GFED3 biomass? :--- => monthly GFED3? : F => daily GFED3? : F => 3-hr GFED3? : F Individual NOx sources :--- => Use aircraft NOx? : T => Use aircraft RCP? : F => Use lightning NOx : T => Scale glb flrate?: T => OTD reg redist? : F => OTD loc redist? : T => Use CTH param? : T => Use MFLUX param? : F => Use PRECON param?: F => Use soil NOx : T Use SHIP emissions :--- => global EDGAR ? : F => global ICOADS ? : T => global RCP ? : F => EMEP over EUROPE ? : T => ship SO2 Corbett ? : F => ship SO2 Arctas ? : T Use COOKE BC/OC (N. Am.): T Use AVHRR-derived LAI? : F ------------------------+------------------------------------------------------ %%% AEROSOL MENU %%% : Online SULFATE AEROSOLS : T Online CRYST/AQ AEROSOLS: F Online CARBON AEROSOLS : T Online 2dy ORG AEROSOLS : F Online DUST AEROSOLS : T => Use DEAD emissions? : T Online SEASALT AEROSOLS : T -- SALA radius bin [um]: .01 0.5 -- SALC radius bin [um]: 0.5 8.0 Online dicarb. chem. : F ------------------------+------------------------------------------------------ %%% DEPOSITION MENU %%% : Turn on Dry Deposition? : T Turn on Wet Deposition? : T ------------------------+------------------------------------------------------ %%% CHEMISTRY MENU %%% : Turn on Chemistry? : T Chemistry Timestep [min]: 60 Use Embedded Chemistry? : F -- IE0, JE0, IE1, JE1 : 0 0 0 0 Read and save CSPEC_FULL: F turn on lin. strat chem?: F Use LINOZ for strat Ox? : F ------------------------+------------------------------------------------------ %%% HTAP SIM MENU %%% : Use HTAP v2 Emissions : F Sector Scaling Factors :--- => AIR : 1.0 => SHIPS : 1.0 => ENERGY : 1.0 => INDUSTRY : 1.0 => TRANSPORT : 1.0 => RESIDENTIAL : 1.0 => AGRICULTURE : 1.0 Species Scaling Factors :--- => BC : 1.0 => CO : 1.0 => OC : 1.0 => NH3 : 1.0 => NOx : 1.0 => SO2 : 1.0 => VOCs : 1.0 Source Mask Regions :--- => OCEANS : F => US + CANADA : F => EUROPE + TURKEY : F => SOUTH ASIA : F => EAST ASIA : F => SOUTH EAST ASIA : F => AUSTRALIA + NEW ZEL: F => NORTH AFRICA : F => SUB SAHARAN AFRICA : F => MIDDLE EAST : F => MEXICO + CARIBBEAN : F => SOUTH AMERICA : F => RUSSIA + UKRAINE : F => CENTRAL ASIA : F => ARTIC CIRCLE : F => ANTARCTIC : F Receptor Mask :--- => Use receptor mask ?: F => BALTIC SEA : F => NORTH ATLANTIC OCEA: F => SOUTH ATLANTIC OCEA: F => NORTH PACIFIC OCEAN: F => SOUTH PACIFIC OCEAN: F => INDIAN OCEAN : F => HUDSON BAY : F => MEDITERRANEAN SEA : F => BLACK AND CASPIAN S: F => NORTH EAST US : F => SOUTH EAST US : F => NORTH WEST US : F => SOUTH WEST US : F => EAST CANADA : F => W CANADA, ALASKA (U: F => NORTH WEST EUROPE : F => SOUTH WEST EUROPE : F => EASTERN EUROPE : F => GREECE, TURKEY, CYP: F => NORTH INDIA, NEPAL,: F => SOUTH INDIA, SRI LA: F => INDIAN HIMALAYA : F => NORTH EAST CHINA : F => SOUTH EAST CHINA : F => WEST CHINA, MONGOLI: F => NORTH ANS SOUTH KOR: F => JAPAN : F => CHINA, TIBET HIMALA: F => INDONESIA, MALAYSIA: F => THAILAND, VIETNAM, : F => PACIFIC : F => AUSTRALIA : F => NEW ZELAND : F => EGYPT : F => REST OF NORTH AFRIC: F => SAHEL : F => CONGO,GHANA, GUINEA: F => BURUNDI, KENYA, ETH: F => ANGOLA, MALAWI, SOU: F => LEBANON, ISRAEL, SY: F => OMAN, QUATAR, YEMEN: F => IRAN, IRAK : F => MEXICO : F => CENTRAL AMERICA : F => CARIBBEAN : F => COLOMBIA, VENEZUELA: F => SOUTH BRAZIL : F => REST OF BRAZIL : F => URUGUAY, PARAGUAY, : F => PERU, ECUADOR : F => RUSSIA WEST : F => RUSSIA EAST : F => BELORUSSIA + UKRAIN: F => CENTRAL ASIA : F => ARTIC CIRCLE, GREEN: F => ANTARCTIC : F => SOUTHERN OCEAN : F ------------------------+------------------------------------------------------ %%% OUTPUT MENU %%% : 123456789.123456789.123456789.1--1=ZERO+2=BPCH Schedule output for JAN : 3030000000000003000000000000000 Schedule output for FEB : 30000000000000000000000000000 Schedule output for MAR : 3000000000000000000000000000000 Schedule output for APR : 300000000000000000000000000000 Schedule output for MAY : 3000000000000003000000000000003 Schedule output for JUN : 300000000000000300000000000300 Schedule output for JUL : 3003000000000003000000000000000 Schedule output for AUG : 3000000000000003000000000000000 Schedule output for SEP : 300000000000000000000000000000 Schedule output for OCT : 3000000000000000000000000000000 Schedule output for NOV : 300000000000000000000000000000 Schedule output for DEC : 3000000000000000000000000000000 ------------------------+------------------------------------------------------ %%% GAMAP MENU %%% : diaginfo.dat path : diaginfo.dat tracerinfo.dat path : tracerinfo.dat ------------------------+------------------------------------------------------ %%% DIAGNOSTIC MENU %%% : Binary punch file name : ctm.bpch Diagnostic Entries ---> : L Tracers to print out for each diagnostic ND01: Rn/Pb/Be source : 0 all ND02: Rn/Pb/Be decay : 0 all ND03: Hg emissions, P/L : 0 all ND04: CO2 sources : 0 all ND05: Sulfate prod/loss : 0 all ND06: Dust aer source : 0 all ND07: Carbon aer source : 0 all ND08: Seasalt aer source: 0 all ND09: - : 0 all ND10: - : 0 all ND11: Acetone sources : 0 all ND12: BL fraction : 0 all ND13: Sulfur sources : 0 all ND14: Cld conv mass flx : 0 all ND15: BL mix mass flx : 0 all ND16: LS/Conv prec frac : 0 all ND17: Rainout fraction : 0 all ND18: Washout fraction : 0 all ND19: - : 0 all ND21: Optical depths : 0 all ND22: J-Values : 0 1 7 8 20 99 => JV time range : 11 13 ND24: E/W transpt flx : 0 all ND25: N/S transpt flx : 0 all ND26: U/D transpt flx : 0 all ND27: Strat NOx,Ox,HNO3 : 0 1 2 7 ND28: Biomass emissions : 1 1 4 5 9 10 11 18 19 20 21 26 30 34 35 ND29: CO sources : 1 all ND30: Land Map : 0 all ND31: Surface pressure : 0 all ND32: NOx sources : 1 all ND33: Column tracer : 1 all ND34: Biofuel emissions : 1 1 4 5 9 10 11 18 19 20 21 27 ND35: Tracers at 500 mb : 1 all ND36: Anthro emissions : 1 all ND37: Updraft scav frac : 0 all ND38: Cld Conv scav loss: 0 all ND39: Wetdep scav loss : 0 all ND41: Afternoon PBL ht : 0 all ND42: - : 0 all ND43: Chem OH,NO,HO2,NO2: 47 all ==> OH/HO2 time range : 0 24 ==> NO/NO2 time range : 10 14 ND44: Drydep flx/vel : 0 all ND45: Tracer Conc's : 47 1 2 3 4 6 7 8 20 ==> ND45 Time range : 0 24 ND46: Biogenic emissions: 1 all ND47: 24-h avg trc conc : 47 1 2 4 6 20 ND52: - : 0 all ND53: - : 0 all ND54: Time in t'sphere : 0 all ND55: Tropopause height : 0 all ND56: - : 0 all ND57: - : 0 all ND58: - : 0 all ND59: PM Tracers ug/m3 : 0 all ND60: - : 0 all ND61: - : 0 all ND62: Inst column maps : 0 all ND63: - : 0 all ND64: - : 0 all ND66: DAO 3-D fields : 47 all ND67: DAO 2-D fields : 47 all ND68: Airmass/Boxheight : 0 all ND69: Surface area : 1 all ND70: Debug output : 0 all ------------------------+------------------------------------------------------ %%% PLANEFLIGHT MENU %%%: Turn on plane flt diag? : F Flight track info file : Planeflight.dat.YYYYMMDD Output file name : plane.log.YYYYMMDD ------------------------+------------------------------------------------------ %%% ND48 MENU %%% : Turn on ND48 stations : F Station Timeseries file : stations.YYYYMMDD Frequency [min] : 60 Number of stations : 0 ------------------------+------------------------------------------------------ %%% ND49 MENU %%% : Turn on ND49 diagnostic : T Inst 3-D timeser. file : ts.YYYYMMDD.bpch Tracers to include : 75 89 Frequency [min] : 120 IMIN, IMAX of region : 70 30 JMIN, JMAX of region : 23 46 LMIN, LMAX of region : 1 1 ------------------------------------------------------------------------------- %%% ND50 MENU %%% : Turn on ND50 diagnostic : F 24-hr avg timeser. file : ts_24h_avg.YYYYMMDD.bpch Tracers to include : 82 83 84 85 86 87 IMIN, IMAX of region : 1 72 JMIN, JMAX of region : 1 46 LMIN, LMAX of region : 1 1 ------------------------------------------------------------------------------- %%% ND51 MENU %%% : Turn on ND51 diagnostic : F LT avg timeseries file : ts_satellite.YYYYMMDD.bpch Tracers to include : 82 83 84 85 86 87 GMT Hour for disk write : 0 Avg Period [LT hours] : 10 14 IMIN, IMAX of region : 1 72 JMIN, JMAX of region : 1 46 LMIN, LMAX of region : 1 1 ------------------------+------------------------------------------------------ %%% ND51b MENU %%% : Turn on ND51 diagnostic : F LT avg timeseries file : ts_satellite-2.YYYYMMDD.bpch Tracers to include : 88 GMT Hour for disk write : 0 Avg Period [LT hours] : 10 14 IMIN, IMAX of region : 1 72 JMIN, JMAX of region : 1 46 LMIN, LMAX of region : 1 1 ------------------------+------------------------------------------------------ %%% ND51c MENU %%% : Turn on ND51 diagnostic : F LT avg timeseries file : ts_satellite-3.YYYYMMDD.bpch Tracers to include : 89 GMT Hour for disk write : 0 Avg Period [LT hours] : 10 14 IMIN, IMAX of region : 1 72 JMIN, JMAX of region : 1 46 LMIN, LMAX of region : 1 1 ------------------------+------------------------------------------------------ %%% ND51d MENU %%% : Turn on ND51 diagnostic : F LT avg timeseries file : ts_satellite-4.YYYYMMDD.bpch Tracers to include : 90 GMT Hour for disk write : 0 Avg Period [LT hours] : 10 14 IMIN, IMAX of region : 1 72 JMIN, JMAX of region : 1 46 LMIN, LMAX of region : 1 1 ------------------------+------------------------------------------------------ %%% PROD & LOSS MENU %%%: Turn on P/L (ND65) diag?: T # of levels for ND65 : 47 Save O3 P/L (ND20)? : F Number of P/L families : 4 1st chemical family : POX: O3 NO2 2NO3 PAN PMN PPN HNO4 3N2O5 HNO3 2nd chemical family : LOX: O3 NO2 2NO3 PAN PMN PPN HNO4 3N2O5 HNO3 3rd chemical family : PCO: CO 4th chemical family : LCO: CO ------------------------+------------------------------------------------------ %%% ARCHIVED OH MENU %%%: Dir w/ archived OH files: /data/ctm/GEOS_MEAN/OHmerge/v5-07-08/ ------------------------+------------------------------------------------------ %%% O3 P/L MENU %%% : Dir w/ O3 P/L rate files: /data/ctm/GEOS_MEAN/O3_PROD_LOSS/2003.v6-01-05/ ------------------------+------------------------------------------------------ %%% NESTED GRID MENU %%%: Save TPCORE BC's : F Input BCs at 2x2.5? : F Over North America? : F TPCORE NA BC directory : BC_4x5_NA/ Over Europe? : F TPCORE EU BC directory : BC_2x25_EU/ Over China? : F TPCORE CH BC directory : BC_2x25_CH/ Over Custom Region? : F TPCORE BC directory : BC_4x5_NA/ BC timestep [min] : 180 LL box of BC region : 11 29 UR box of BC region : 25 41 1x1 offsets I0_W, J0_W : 6 6 ------------------------+------------------------------------------------------ %%% BENCHMARK MENU %%% : Save benchmark output? : F File w/ initial Ox : Ox.mass.initial File w/ final Ox : Ox.mass.final ------------------------+------------------------------------------------------ %%% UNIX CMDS MENU %%% : Background symbol : & Redirect symbol : > Unix remove command : rm -f Unix pathname separator : / Unix wildcard character : * Unix unzip command : gzip -dc Zip file suffix : .gz ------------------------+------------------------------------------------------ END OF FILE : ------------------------+------------------------------------------------------