158 lines
3.6 KiB
Bash
158 lines
3.6 KiB
Bash
#!/bin/bash
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INPUT_FOLDER=`cat INPUT_FOLDER`
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cp Objects.default Objects.mkl
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# Note this line gives an error but WORKS correctly
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if [ -n $(grep ' => offdiagonal : F' $INPUT_FOLDER/input.gcadj) ]; then
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find="geos_chem_adj_mod.o"
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replace="covariance_mod.o \
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geos_chem_adj_mod.o"
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sed -e "s/$find/$replace/g" Objects.mkl > Objects.off-diag
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mv Objects.off-diag Objects.mkl
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fi
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# Note this line gives an error but WORKS correctly
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if [ -n $(grep 'Compute BFGS inverse Hessian : F' $INPUT_FOLDER/input.gcadj) ]; then
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find="inv_hessian_mod.o"
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replace="inv_hessian_mod.o \
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inv_hessian_lbfgs_mod.o"
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sed -e "s/$find/$replace/g" Objects.mkl > Objects.lbfgs
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mv Objects.lbfgs Objects.mkl
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fi
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if [ $1 = "HDF" ]; then
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find="getifsun.o"
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replace="getifsun.o \
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gvchsq.o "
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sed -e "s/$find/$replace/g" Objects.mkl > output1
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find="input_mod.o"
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replace="input_mod.o \
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He4IncludeModule.o \
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He4ErrorModule.o \
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He4GridModule.o \
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He4SwathModule.o \
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findinv.o \
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airsv5_mod.o \
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airs_co_obs_mod.o \
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HdfIncludeModule.o \
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HdfSdModule.o \
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HdfVdModule.o \
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mls_o3_obs_mod.o \
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mls_hno3_obs_mod.o \
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omi_no2_obs_mod.o \
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omi_so2_obs_mod.o \
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omi_ch2o_obs_mod.o \
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osiris_no2_obs_mod.o \
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interp.o \
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gaussj.o \
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iasi_co_obs_mod.o \
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mopitt_obs_mod.o"
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sed -e "s/$find/$replace/g" output1 > output
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rm output1
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mv output Objects.mk
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fi
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if [ $1 = "SAT_NETCDF" ]; then
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find="rpmares_mod.o"
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replace="rpmares_mod.o \
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gosat_co2_mod.o \
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tes_nh3_mod.o \
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tes_o3_mod.o \
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iasi_o3_obs_mod.o \
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tes_o3_irk_mod.o"
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sed -e "s/$find/$replace/g" Objects.mkl > output1
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find="tes_ch4_mod.o"
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replace="tes_ch4_mod.o \
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scia_ch4_mod.o"
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sed -e "s/$find/$replace/g" output1 > output
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rm output1
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mv output Objects.mk
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fi
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if [ $1 = "LIDORT" ]; then
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find="population_mod.o"
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replace="population_mod.o \
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mie_mod.o \
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lidort_mod.o"
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sed -e "s/$find/$replace/g" Objects.mkl > output
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mv output Objects.mk
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fi
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if [ $1 = "DEFAULT" ]; then
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mv Objects.mkl Objects.mk
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fi
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if [ $1 = "HDF_NETCDF" ]; then
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find="rpmares_mod.o"
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replace="rpmares_mod.o \
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gosat_co2_mod.o \
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tes_nh3_mod.o \
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tes_o3_mod.o \
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iasi_o3_obs_mod.o \
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tes_o3_irk_mod.o"
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sed -e "s/$find/$replace/g" Objects.mkl > output1
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find="tes_ch4_mod.o"
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replace="tes_ch4_mod.o \
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scia_ch4_mod.o"
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sed -e "s/$find/$replace/g" output1 > output2
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#rm output1
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#mv output Objects.mk
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find="getifsun.o"
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replace="getifsun.o \
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gvchsq.o "
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sed -e "s/$find/$replace/g" output2 > output3
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find="input_mod.o"
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replace="input_mod.o \
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He4IncludeModule.o \
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He4ErrorModule.o \
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He4GridModule.o \
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He4SwathModule.o \
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findinv.o \
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airsv5_mod.o \
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airs_co_obs_mod.o \
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HdfIncludeModule.o \
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HdfSdModule.o \
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HdfVdModule.o \
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mls_o3_obs_mod.o \
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mls_hno3_obs_mod.o \
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omi_no2_obs_mod.o \
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omi_so2_obs_mod.o \
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omi_ch2o_obs_mod.o \
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osiris_no2_obs_mod.o \
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interp.o \
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gaussj.o \
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iasi_co_obs_mod.o \
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mopitt_obs_mod.o"
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sed -e "s/$find/$replace/g" output3 > output
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rm output1
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rm output2
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rm output3
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mv output Objects.mk
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fi
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